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Pete Broad
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

I've had 2 more, both on my Android 9.0 phone. Both completed in 33 hours and are awaiting validation.

Pete
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Robokapp
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

they kept restarting and forgetting their progression and whatnot. One I couldnt get to start no matter what i did and I aborted it. Other 7 completed after 2 days but only credited about 15 hours. weird.
[Feb 8, 2020 6:48:08 AM]   Link   Report threatening or abusive post: please login first  Go to top 
ThreadRipper
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

Got some on one of my Banana PI M3 devices.
However, the CPU efficieny isn't very good. The worst WU had these stats:

BETA_ MCM1_ 9800033_ 0070_ 1-- android_3b03982
4 Valid 2/6/20 02:32:51 2/6/20 12:41:12 0.27 / 10.10 129.1 / 104.0

So, CPU time only 0.28h and elapsed time over 10 hours. Is this perhaps a RAM size issue? Perhaps I'm running 6/8 cores with a total of 2GB of ram and it makes it have to write to disk? Will have to try lower the amount of simultaneous WUs.

UPDATE: Wingman needed 7.14h so I am actually suspecting that CPU time of 0.27h is a miscalculation by BOINC? How can the difference be so large otherwise?

One WU errored out: BETA_ MCM1_ 9800033_ 0073_ 0--
Here's the log:

Result Name: BETA_ MCM1_ 9800033_ 0073_ 0--


<core_client_version>7.4.53</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
WARNING: linker: ../../projects/www.worldcommunitygrid.org/wcgrid_beta17_map_7.53_arm-android-linux-gnu: unused DT entry: type 0x6ffffffe arg 0x1e50
WARNING: linker: ../../projects/www.worldcommunitygrid.org/wcgrid_beta17_map_7.53_arm-android-linux-gnu: unused DT entry: type 0x6fffffff arg 0x2
Commandline = ../../projects/www.worldcommunitygrid.org/wcgrid_beta17_map_7.53_arm-android-linux-gnu -SettingsFile MCM1_9800033_0073.txt -DatabaseFile dataset-sarc-draft1.txt
Settings File
DateOfDesign = 20191101
Designer = Krembil/cubes
WorkOrderID = MCM1_9800033_0073
DatasetID = sarc-draft1
RSeed = 5554

NumberOfGenesInStartingSignature = 20
NumberOfGenesInSignatureMin = 20
NumberOfGenesInSignatureMax = 20
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 1782
//SearchAlgorithmSequentialStartPosition = 304
RunPermutationAlgorithm = 0
//PermutationGroups = C
//PermutationGroupsForReplacement = F
//PermutationAlgorithm = insertEnumerateFromGroup
//PermutationsNumIterations = 5
//OptimizationAlgorithmFrequency = 0 0 1

// Do we need these?
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
//Pseudocounts = 0.2

FitnessFn = 0
MinFitness = 0.4

NReps = 100
VMethod = CV
TrainFrac = 0.7
// Alternatively
////NReps = 10
////TrainFrac = 0.7
////NFolds = 10
//VMethod = LOO

// Apparently the default
//ModelType = SVM
SvmArgs = "-v 0 -t 3 -c 0.01 -d 2 -r 0 -s 1"
SvmLearnLimit = 250000



[03:34:05] Initializing
terminating with uncaught exception of type Exception
/buildbot/src/android/ndk-release-r18/external/libcxx/../../external/libcxxabi/src/abort_message.cpp:73: abort_message: assertion "terminating with uncaught exception of type Exception" failed
SIGABRT: abort called

Exiting...

</stderr_txt>
]]>
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[Edit 1 times, last edit by ThreadRipper at Feb 8, 2020 11:07:04 PM]
[Feb 8, 2020 11:04:51 PM]   Link   Report threatening or abusive post: please login first  Go to top 
PowerFactor
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

I got 7 mcm betas between 3 tinkerboards running android 7. They are all valid finishing between 7 an 14 hours of CPU time
[Feb 8, 2020 11:36:27 PM]   Link   Report threatening or abusive post: please login first  Go to top 
ThreadRipper
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

I got 7 mcm betas between 3 tinkerboards running android 7. They are all valid finishing between 7 an 14 hours of CPU time

How are your stats on CPU time vs Elapsed time looking? From my post above you can see I am having very strange figures, so it would be interesting to know.
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PowerFactor
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

The CPU time is 75% the elapsed time because android only allows the beta version of boinc (7.16) to run at 75% CPU. For instance, one beta took 13.33 hours CPU / 18.24 hours elapsed.

I'm sure there is a switch in android to run boinc at 100%, but I haven't looked into that yet.
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

Easy, but at your own peril, default 75% 'because' they can run warm at full load. Some folks have set up their crunching tablets/phones in an array with a USB fan on it. Upright or leaning is better than lying down for sure for more air circulation aka cooling.
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Dangertk
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

All the 4 beta WU I received are valid and ran about 11-14 hours.
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[Edit 1 times, last edit by Dangertk at Feb 10, 2020 8:02:52 AM]
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ThreadRipper
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

The CPU time is 75% the elapsed time because android only allows the beta version of boinc (7.16) to run at 75% CPU. For instance, one beta took 13.33 hours CPU / 18.24 hours elapsed.

I'm sure there is a switch in android to run boinc at 100%, but I haven't looked into that yet.


I see, thanks, that would explain some of the results I returned w.r.t. CPU/elapsed time. But not all, since I had some with like 0.27h CPU time having Elapsed time of 10.1 hours.
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Former Member
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Re: Mapping Cancer Markers Beta Test January 22, 2020 [Android only] [Issues Thread]

Closing in, see monthly phone conference notes:

https://www.worldcommunitygrid.org/forums/wcg...ad,40867_offset,70#621169
[Feb 12, 2020 6:47:53 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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