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uplinger
Former World Community Grid Tech
Joined: May 23, 2005
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Is 'Tomorrow' the 13th, our side of the pond? Not that it matters here, since our unlucky number is considered the 17th.

Anyways, like everyone will agree... bring it on. :D


Since I'm going to try to get this started in the next few minutes, version 7.28 will be released on the 12th :) UTC time. I am moving some work now so that I can start it in the next 15 minutes.

Thanks,
-Uplinger
[Dec 12, 2013 9:30:00 PM]   Link   Report threatening or abusive post: please login first  Go to top 
yoro42
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Just took a long time but ended well. Now onto 7.28
BETA_ MCM1_ 0000218_ 9618_ 3-- jamal Valid 12/11/13 03:35:18 12/12/13 22:53:46 41.76 / 43.14 114.1 / 197.5

Result Log

Result Name: BETA_ MCM1_ 0000218_ 9618_ 3--
<core_client_version>7.2.33</core_client_version>
<![CDATA[
<stderr_txt>
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.27_windows_intelx86 -SettingsFile MCM1_0000218_9618.txt -DatabaseFile dataset-17_72_SDG_v1.txt
Settings File
DateOfDesign = 11/08/2013
Designer = PMCC_OCI
WorkOrderID = 0000218_9618
DatasetID = 17_72_SDG_v1
NumberOfGenesInStartingSignature = 20
NumberOfGenesInSignatureMin = 10
NumberOfGenesInSignatureMax = 20
GroupVectorValues = {A}{B}{C}{D}{E}{F}
ExplicitStartingGeneSignatures = A B D F
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 1
SearchAlgorithmSequentialStartPosition = 5
RunPermutationAlgorithm = 1
PermutationGroups = A
PermutationGroupsForReplacement = G
PermutationAlgorithm = replaceFromRandomlyToRandomlyGreedy
PermutationsNumIterations = 67911
OptimizationAlgorithmFrequency = 0 0 1
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
NReps = 10
TrainFrac = 0.7
NFolds = 10
VMethod = LOO
ModelType = SVM
FitnessFn = 0
MinFitness = 0.61
SvmArgs = "-v 0 -c 0.1 -t 1 -d 2 -r 0"
SvmLearnLimit = 500000
RSeed = 539618


[20:35:18] Initializing
wcg_learn_limit = 500000
[20:35:40] Running
[20:35:40] EvaluateFitnessOfStartingGeneSignatures 1
[20:35:41]: Computing pass 0
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.27_windows_intelx86 -SettingsFile MCM1_0000218_9618.txt -DatabaseFile dataset-17_72_SDG_v1.txt
[07:25:44] Initializing
wcg_learn_limit = 500000
[07:26:17] Running
[07:26:17] EvaluateFitnessOfStartingGeneSignatures 1
[07:26:18]: Computing pass 0
[15:53:30] Exiting PermutateGeneSignature
[15:53:30] Writing final output
[15:53:30] Closing Output Stream
[15:53:30] Cleaning up
Result.out = 564739.000000
Run complete, CPU time: 150319.787500
15:53:30 (360): called boinc_finish

</stderr_txt>
]]>
----------------------------------------

[Dec 13, 2013 3:53:16 AM]   Link   Report threatening or abusive post: please login first  Go to top 
wplachy
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

BETA_ MCM1_0000218_2138_7 (7.27) has been running for 15:36:35 (15:35:10) shows 32.116% progress and 3:24:19 remaining. Since it was a repair the deadline came and went about 6 hours ago and replacement _8 has been sent.

Any point in allowing this to continue and/or do you want any more info about the task?


BETA_ MCM1_ 0000218_ 2138_ 8-- - In Progress 12/13/13 12:13:54 12/13/13 20:37:53 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 7-- - No Reply 12/13/13 03:49:26 12/13/13 12:13:25 0.00 0.0 / 0.0 <-Mine
BETA_ MCM1_ 0000218_ 2138_ 6-- - No Reply 12/13/13 03:49:25 12/13/13 12:13:24 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 5-- - No Reply 12/12/13 03:48:59 12/13/13 03:48:59 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 4-- - No Reply 12/12/13 03:48:57 12/13/13 03:48:57 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 3-- 727 Pending Validation 12/11/13 03:48:49 12/13/13 07:45:49 51.79 114.1 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 2-- - No Reply 12/11/13 03:48:42 12/12/13 03:48:42 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 1-- - No Reply 12/10/13 03:48:14 12/11/13 03:48:14 0.00 0.0 / 0.0
BETA_ MCM1_ 0000218_ 2138_ 0-- - No Reply 12/10/13 03:48:11 12/11/13 03:48:11 0.00 0.0 / 0.0
----------------------------------------
Bill P

[Dec 13, 2013 7:31:51 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Sgt.Joe
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Since it is a beta, I would let it continue.
Cheers
----------------------------------------
Sgt. Joe
*Minnesota Crunchers*
[Dec 13, 2013 8:02:42 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

[Dec 13, 2013 8:10:17 PM]   Link   Report threatening or abusive post: please login first  Go to top 
wplachy
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Got it. Will let it keep churning, tks
----------------------------------------
Bill P

[Dec 13, 2013 8:13:11 PM]   Link   Report threatening or abusive post: please login first  Go to top 
nasher
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

multiple stop starts multiple reboots with 6+ betas running no issues
----------------------------------------

[Dec 13, 2013 9:51:30 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Coleslaw
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

I had some on my netbook with around 90 hours each get server aborted today. I was surprised it took this long since they were issued with only a 1 day deadline. Oh well. Hopefully I get run time credited for them since they have already been purged from the system.
----------------------------------------

[Dec 14, 2013 12:38:08 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Sgt.Joe
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

This is the only one I have seen like this with cpu time listed, but no elapsed time.
BETA_ MCM1_ 0000218_ 9603_ 0-- HomeComputer Valid 12/10/13 15:20:51 12/13/13 15:20:39 26.77 / 0.00 136.6 / 313.5
Interesting
Cheers
----------------------------------------
Sgt. Joe
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[Dec 14, 2013 3:28:00 AM]   Link   Report threatening or abusive post: please login first  Go to top 
PMH_UK
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Had this resend where -0 had error and no time and -1 had abort and no time shown.
From the credit it may have time but not showing it.

Result Name App Version Number Status Sent Time Time Due / Return Time CPU Time / Elapsed Time (hours) Claimed/ Granted BOINC Credit
BETA_ MCM1_ 0000400_ 5571_ 3-- 727 Valid 12/12/13 10:13:15 13/12/13 00:53:56 3.52 53.2 / 61.3
BETA_ MCM1_ 0000400_ 5571_ 2-- 727 Valid 11/12/13 02:32:59 11/12/13 06:38:29 4.06 69.5 / 61.3
BETA_ MCM1_ 0000400_ 5571_ 1-- 727 User Aborted 10/12/13 16:38:49 11/12/13 02:26:12 0.00 64.1 / 64.1
BETA_ MCM1_ 0000400_ 5571_ 0-- 727 Error 10/12/13 16:38:28 12/12/13 10:13:12 0.00 134.0 / 134.0

Paul.
----------------------------------------
Paul.
[Dec 14, 2013 9:44:30 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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